why not do a cooling pressure test? they loan the tools at advanced auto parts....
if youa are gonna use a gasket sealer use Yammabond.
For what it's worth, I've had, and heard of, multiple horror stories on Cometic gaskets. It sounds like you've got your problem narrowed down. I'd say re-OEM gasket it, and while it's apart, look at your cylinder with a 7, or 11 eye loop and make sure there are no cracks. Then get all the old gasket material off, and make sure you have smooth, and level mating surfaces.
Well guys... I've been working on the bike... I'll start a thread whenI get the time. I might even have a motor swap in mind (KDX... Maybe even a vintage air cooled motor in a modern chasis...) i've got the bike down to the frame as we speak and i'm gonna examine all the parts and check the clearances in the motor. Once I decide I may do a KDX motor swap and then send the frame to the PCers... along with hubs triple tress and some covers.